SMTL ID : 6m06.1 (1 other biounit)

Crystal structure of Lp-PLA2 in complex with a novel covalent inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x BWF: (2S)-2-[(Z)-1,3-bis(oxidanyl)-3-oxidanylidene-prop-1-enyl]pyrrolidine-1-carboxylic acid(Covalent)

BWF.1: 8 residues within 4Å: Chain A: G.99, L.100, S.220, F.221, W.245, F.269, H.298, Q.299 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:W.245, A:F.269 Hydrogen bonds: A:L.100, A:F.221, A:Q.299 Salt bridges: A:H.298

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, F. et al., Identification of Highly Selective Lipoprotein-Associated Phospholipase A2 (Lp-PLA2) Inhibitors by a Covalent Fragment-Based Approach. J.Med.Chem. (2020)

Release Date

2020-12-30

Peptides

Platelet-activating factor acetylhydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Platelet-activating factor acetylhydrolase

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