SMTL ID : 6m0r.1

2.7A Yeast Vo state3

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-8-1-1-1-mer
Ligands
1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
30 x PEE: 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine(Non-covalent)
1 x PPV: PYROPHOSPHATE(Non-covalent)
1 x EYR: (6~{E},10~{E},14~{E},18~{E},22~{E},26~{E},30~{R})-2,6,10,14,18,22,26,30-octamethyldotriaconta-2,6,10,14,18,22,26-heptaene(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Roh, S.H. et al., Cryo-EM and MD infer water-mediated proton transport and autoinhibition mechanisms of V o complex. Sci Adv (2020)
Release Date
2020-11-04
Peptides
V-type proton ATPase subunit c': A
V-type proton ATPase subunit c'': B
V0 assembly protein 1: C
V-type proton ATPase subunit e: D
V-type proton ATPase subunit c: EGHIJKLM
Uncharacterized protein YPR170W-B: F
V-type proton ATPase subunit d: N
V-type proton ATPase subunit a, vacuolar isoform: O
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
D
B
C
C
N
D
M
E
E
G
F
H
G
I
H
J
I
K
J
L
K
M
L
F
O
N
B
O
A
Membrane
We predict this structure to be a membrane protein.

V-type proton ATPase subunit c'

V-type proton ATPase subunit c''

V0 assembly protein 1

V-type proton ATPase subunit e

V-type proton ATPase subunit c

Toggle Identical (EGHIJKLM)

Uncharacterized protein YPR170W-B

V-type proton ATPase subunit d

V-type proton ATPase subunit a, vacuolar isoform

Related Entries With Identical Sequence

3j9t.1 | 3j9u.1 | 3j9v.1 | 5vox.1 | 5voy.1 | 5voz.1 | 6c6l.1 | 6m0s.1 | 6o7t.1 | 6o7u.1 | 6o7v.1 | 6o7w.1 | 6o7x.1 | 6pe4.1 | 6pe5.1 | 7fda.1 | 7fdb.1 | 7fdc.1 | 7tao.1 | 7tap.1 | 7tmr.1 | 7tms.1 | 7tmt.1 | 8eas.1 | 8eat.1 | 8eau.1