SMTL ID : 6m5s.1

The coordinates of the apo hexameric terminase complex

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain B: C.120, H.123 Chain C: C.90, H.92 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain C Metal complexes: B:C.120, B:H.123, C:C.90 ZN.2: 5 residues within 4Å: Chain B: C.196, C.199, C.222, N.223, H.224 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.196, B:C.199, B:C.222, B:H.224

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, Y. et al., Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation. Protein Cell (2020)

Release Date

2020-10-28

Peptides

Tripartite terminase subunit 3: A
Tripartite terminase subunit 1: B
Tripartite terminase subunit 2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Tripartite terminase subunit 3

Tripartite terminase subunit 1

Tripartite terminase subunit 2

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