SMTL ID : 6m5y.1

Structure of human galectin-1 tandem-repeat mutant with lactose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.38 Å

Oligo State

monomer

Ligands

1 x BGC- GAL: beta-D-galactopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-GAL.1: 8 residues within 4Å: Chain A: H.45, N.47, R.49, H.53, N.62, W.69, E.72, R.74 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.49, A:R.49, A:E.72, A:R.74, A:R.49, A:H.53, A:N.62 Water bridges: A:H.53, A:E.72, A:R.74, A:N.47, A:H.53, A:H.53

1 x GLC- GAL: beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GAL.2: 8 residues within 4Å: Chain A: H.182, N.184, R.186, H.190, N.199, W.206, E.209, R.211 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.184, A:R.186, A:H.190, A:N.199, A:E.209, A:R.186, A:R.186, A:R.211 Water bridges: A:N.184, A:D.192, A:D.192, A:E.209, A:R.211

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nonaka, Y. et al., Crystal structure and conformational stability of a galectin-1 tandem-repeat mutant with a short linker. Glycobiology (2021)

Release Date

2021-03-17

Peptides

Galectin-1,Galectin-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Galectin-1,Galectin-1