SMTL ID : 6m8y.1

PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR AIPF

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

monomer

Ligands

1 x ACE- ILE- PRO- PHL: AIPF PEPTIDE INHIBITOR(Non-covalent)

ACE-ILE-PRO-PHL.1: 18 residues within 4Å: Chain A: I.34, G.76, E.79, W.80, S.132, L.133, G.134, W.135, S.166, G.168, D.169, E.170, E.174, R.178, S.189, G.284, T.285, S.286 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:E.79, A:W.135 Hydrogen bonds: A:S.132, A:G.134, A:G.134, A:D.169, A:R.178, A:S.286, A:S.286

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: D.327, V.328, K.329, G.343, G.345, D.347 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.327, A:V.328, A:G.343, A:G.345, A:D.347, H2O.6

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 8 residues within 4Å: Chain A: N.8, P.9, F.47, A.50, N.51, L.272, Y.274, L.279 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.8, A:N.51, A:N.51, A:L.272, A:Y.274 GOL.4: 7 residues within 4Å: Chain A: A.4, T.204, N.220, E.221, A.266, G.268, T.269 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.221, A:E.221 Water bridges: A:T.204, A:N.220 GOL.5: 6 residues within 4Å: Chain A: N.124, V.125, A.126, K.127, Q.161, N.305 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.124, A:N.124 Water bridges: A:T.28, A:V.125, A:K.127, A:K.127, A:N.305, A:N.305

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 3 residues within 4Å: Chain A: P.195, P.243, W.245 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wlodawer, A. et al., Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase. Biochemistry (2001)

Release Date

2018-10-24

Peptides

SEDOLISIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SEDOLISIN

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