SMTL ID : 6m9m.1

Streptococcus mutans AlkD2 bound to inosine-5'-monophosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x IMP: INOSINIC ACID(Non-covalent)

IMP.1: 5 residues within 4Å: Chain A: H.18, G.19, W.85, R.86, E.89 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.19 Water bridges: A:R.86, A:R.86 Salt bridges: A:H.18, A:R.86 pi-Stacking: A:W.85, A:W.85, A:W.85

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: R.131, I.132, N.135, R.136 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shi, R. et al., Structural Biology of the HEAT-Like Repeat Family of DNA Glycosylases. Bioessays (2018)

Release Date

2018-10-10

Peptides

AlkD2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

AlkD2