SMTL ID : 6maw.1

F9 Pilus Adhesin FmlH Lectin Domain from E. coli UTI89 in Complex with Galactoside N-[(2S,3R,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-{[S-methyl-6-(trifluoromethyl)-[1,1'-biphenyl]-3'-yl]oxy}oxan-3-yl]acetamide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x JC7: N-[2'-{[2-(acetylamino)-2-deoxy-beta-D-galactopyranosyl]oxy}-6'-(trifluoromethyl)[1,1'-biphenyl]-3-yl]methanesulfonamide(Non-covalent)

JC7.1: 14 residues within 4Å: Chain A: F.1, S.2, S.10, I.11, G.12, N.44, D.45, Y.46, D.51, D.53, K.132, A.134, G.139, N.140 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:D.45, A:Y.46 Hydrogen bonds: A:F.1, A:F.1, A:N.44, A:D.45, A:D.53, A:K.132, A:N.140, A:R.142 Water bridges: A:A.13, A:A.13 Salt bridges: A:K.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maddirala, A.R. et al., Biphenyl Gal and GalNAc FmlH Lectin Antagonists of Uropathogenic E. coli (UPEC): Optimization through Iterative Rational Drug Design. J.Med.Chem. (2019)

Release Date

2019-09-04

Peptides

Fimbrial adhesin FmlD: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fimbrial adhesin FmlD

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