SMTL ID : 6mby.1

Carbonic Anhydrase II in complex with Ferulic Acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.91, H.93, E.103, H.116, T.195 Ligands: FER.2 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.91, A:H.93, A:H.116, H2O.1, H2O.3

1 x FER: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID(Non-covalent)

FER.2: 12 residues within 4Å: Chain A: I.88, Q.89, H.91, V.118, F.127, V.131, L.194, T.195, T.196, P.198 Ligands: ZN.1, GOL.3 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.127, A:L.194 Hydrogen bonds: A:T.195, A:T.196, A:T.196, A:T.196 Salt bridges: A:H.91

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 11 residues within 4Å: Chain A: W.2, Y.4, N.59, H.61, A.62, N.64, Q.89, H.91, H.93, T.196 Ligands: FER.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.59, A:N.64, A:Q.89

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4: 7 residues within 4Å: Chain A: Y.4, P.10, D.239, N.240, W.241, R.242, P.243 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:D.239 pi-Cation interactions: A:W.241, A:W.241

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lomelino, C.L. et al., Carbonic anhydrase II in complex with carboxylic acid-based inhibitors. Acta Crystallogr F Struct Biol Commun (2019)

Release Date

2019-03-13

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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