SMTL ID : 6mcy.1 (3 other biounits)

Crystal structure of mouse Bak

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

3 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 4 residues within 4Å: Chain A: W.108, G.109, F.166 Ligands: FMT.3 No protein-ligand interaction detected (PLIP) FMT.2: 7 residues within 4Å: Chain A: Y.21, L.25, G.65, D.66, N.69, G.116, R.120 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.69, A:R.120 FMT.3: 3 residues within 4Å: Chain A: I.64, F.166 Ligands: FMT.1 1 PLIP interactions: 1 interactions with chain A Water bridges: A:F.166

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 4 residues within 4Å: Chain A: Y.91, S.139, F.140, D.143 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.143

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

van Delft, M.F. et al., A small molecule interacts with VDAC2 to block mouse BAK-driven apoptosis. Nat.Chem.Biol. (2019)

Release Date

2019-09-11

Peptides

Bcl-2 homologous antagonist/killer: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bcl-2 homologous antagonist/killer

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