- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MEV: (R)-MEVALONATE(Non-covalent)
- 2 x K: POTASSIUM ION(Non-covalent)
- 14 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 3 residues within 4Å:- Chain A: S.74, F.114, L.116
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:S.74
- Water bridges: A:S.74, A:S.74
GOL.4: 5 residues within 4Å:- Chain A: Y.142, F.146, G.147, G.148, K.157
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Y.142, A:G.147, A:K.157
GOL.5: 4 residues within 4Å:- Chain A: S.5, R.36, R.38, D.85
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:S.5, A:S.5, A:R.36, A:D.85
- Water bridges: A:R.38
GOL.6: 2 residues within 4Å:- Chain A: D.57, K.60
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:K.60, A:K.60
GOL.7: 5 residues within 4Å:- Chain A: L.41, N.42, N.78, G.79, F.112
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:N.42, A:N.42, A:N.78, A:G.79
- Water bridges: A:N.78
GOL.8: 8 residues within 4Å:- Chain A: G.106, N.109, E.110, L.116, L.118, I.121, L.300, V.302
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:G.106, A:N.109
GOL.9: 8 residues within 4Å:- Chain A: P.89, V.90, G.91, S.92, L.94, G.95, S.96, S.97
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:P.89, A:S.92, A:L.94, A:G.95, A:S.96, A:S.97
- Water bridges: A:A.98, A:D.140
GOL.12: 5 residues within 4Å:- Chain B: G.215, D.216, Y.217, A.218, F.254
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:D.216, B:D.216, B:Y.217, B:A.218
- Water bridges: B:G.215
GOL.13: 9 residues within 4Å:- Chain B: V.90, G.91, G.93, L.94, G.95, S.96, S.97, D.140
- Ligands: K.11
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:G.91, B:G.95, B:S.96, B:S.96, B:S.97, B:D.140, B:D.140
- Water bridges: B:G.93, B:S.97
GOL.14: 6 residues within 4Å:- Chain B: V.90, D.169, G.171, V.172, F.173, G.265
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:G.171, B:G.265
GOL.15: 3 residues within 4Å:- Chain B: F.58, A.66, K.131
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:K.131
GOL.16: 1 residues within 4Å:- Chain B: D.162
No protein-ligand interaction detected (PLIP)GOL.17: 6 residues within 4Å:- Chain B: S.92, G.93, S.174, T.176, A.261, G.262
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:S.92, B:G.93, B:S.174, B:S.174, B:G.262
- Water bridges: B:C.266
GOL.18: 2 residues within 4Å:- Chain B: V.172, E.240
1 PLIP interactions:1 interactions with chain B- Water bridges: B:L.239
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Miller, B.R. et al., Structural insight into substrate and product binding in an archaeal mevalonate kinase. PLoS ONE (2018)
- Release Date
- 2018-12-19
- Peptides
- Mevalonate kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MEV: (R)-MEVALONATE(Non-covalent)
- 2 x K: POTASSIUM ION(Non-covalent)
- 14 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Miller, B.R. et al., Structural insight into substrate and product binding in an archaeal mevalonate kinase. PLoS ONE (2018)
- Release Date
- 2018-12-19
- Peptides
- Mevalonate kinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B