SMTL ID : 6me7.2 (1 other biounit)

XFEL crystal structure of human melatonin receptor MT2 (H208A) in complex with 2-phenylmelatonin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

1 x JEY: N-[2-(5-methoxy-2-phenyl-1H-indol-3-yl)ethyl]acetamide(Non-covalent)

JEY.1: 20 residues within 4Å: Chain A: A.193, M.196, G.197, V.200, I.201, L.248, N.251, L.257, T.267, F.268, Q.270, Y.276, V.280, V.281, F.384, L.387, N.388, Y.414, A.417, Y.418 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:M.196, A:V.200, A:L.248, A:L.257, A:F.268, A:F.268, A:V.281, A:F.384, A:L.387, A:Y.414, A:A.417, A:Y.418 Hydrogen bonds: A:N.251, A:Q.270

1 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.2: 4 residues within 4Å: Chain A: V.164, Y.168, E.187, H.188 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.164, A:Y.168, A:Y.168 Hydrogen bonds: A:E.187

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Johansson, L.C. et al., XFEL structures of the human MT2melatonin receptor reveal the basis of subtype selectivity. Nature (2019)

Release Date

2019-04-24

Peptides

Soluble cytochrome b562,Melatonin receptor type 1B,Rubredoxin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Membrane

We predict this structure to be a membrane protein.
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Soluble cytochrome b562,Melatonin receptor type 1B,Rubredoxin

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