SMTL ID : 6met.1

Structural basis of coreceptor recognition by HIV-1 envelope spike

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-mer
Ligands
6 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
7 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x A2G: 2-acetamido-2-deoxy-alpha-D-galactopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Shaik, M.M. et al., Structural basis of coreceptor recognition by HIV-1 envelope spike. Nature (2018)
Release Date
2018-12-12
Peptides
Envelope glycoprotein gp160: A
T-cell surface glycoprotein CD4: B
C-C chemokine receptor type 5: C
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
G
B
A
C
B
Membrane
We predict this structure to be a membrane protein.

Envelope glycoprotein gp160

T-cell surface glycoprotein CD4

C-C chemokine receptor type 5

Related Entries With Identical Sequence

1wio.1 | 1wio.2 | 1wip.1 | 1wip.2 | 1wiq.1 | 1wiq.2 | 5u1f.1 | 6meo.1