SMTL ID : 6mff.1

HLA-DQ2-glia-omega1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: N.120, E.168, W.170 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.168, A:E.168, A:W.170 NAG.2: 1 residues within 4Å: Chain A: N.80 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dahal-Koirala, S. et al., Discriminative T-cell receptor recognition of highly homologous HLA-DQ2-bound gluten epitopes. J. Biol. Chem. (2019)

Release Date

2018-11-21

Peptides

HLA class II histocompatibility antigen, DQ alpha 1 chain: A
MHC class II HLA-DQ-beta-1 - DQ2-glia-omega1 chimeric protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

HLA class II histocompatibility antigen, DQ alpha 1 chain

MHC class II HLA-DQ-beta-1 - DQ2-glia-omega1 chimeric protein

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