- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.54 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x JQS: 5-[(Z)-(aminomethylidene)amino]-1-(5-O-phosphono-beta-D-ribofuranosyl)-1H-imidazole-4-carboxylic acid(Non-covalent)
- 4 x K: POTASSIUM ION(Non-covalent)
K.2: 7 residues within 4Å:- Chain A: G.179, P.180, G.181, C.184
- Chain C: E.346, S.347, H.348
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain C- Metal complexes: A:G.179, A:G.181, A:C.184, C:E.346, C:S.347
K.7: 7 residues within 4Å:- Chain B: G.179, P.180, G.181, C.184
- Chain D: E.346, S.347, H.348
5 PLIP interactions:2 interactions with chain D, 3 interactions with chain B- Metal complexes: D:E.346, D:S.347, B:G.179, B:G.181, B:C.184
K.12: 7 residues within 4Å:- Chain B: E.346, S.347, H.348
- Chain C: G.179, P.180, G.181, C.184
5 PLIP interactions:2 interactions with chain B, 3 interactions with chain C- Metal complexes: B:E.346, B:S.347, C:G.179, C:G.181, C:C.184
K.17: 7 residues within 4Å:- Chain A: E.346, S.347, H.348
- Chain D: G.179, P.180, G.181, C.184
5 PLIP interactions:3 interactions with chain D, 2 interactions with chain A- Metal complexes: D:G.179, D:G.181, D:C.184, A:E.346, A:S.347
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.3: 3 residues within 4Å:- Chain A: E.12, T.198
- Chain D: F.9
1 PLIP interactions:1 interactions with chain A- Water bridges: A:E.12
EDO.8: 3 residues within 4Å:- Chain B: E.12, T.198
- Chain C: F.9
1 PLIP interactions:1 interactions with chain B- Water bridges: B:E.12
EDO.13: 3 residues within 4Å:- Chain A: F.9
- Chain C: E.12, T.198
1 PLIP interactions:1 interactions with chain C- Water bridges: C:E.12
EDO.18: 3 residues within 4Å:- Chain B: F.9
- Chain D: E.12, T.198
1 PLIP interactions:1 interactions with chain D- Water bridges: D:E.12
- 8 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.4: 7 residues within 4Å:- Chain A: E.41, S.42, R.144, P.148, S.149, L.150, N.151
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:E.41, A:E.41
PEG.5: 9 residues within 4Å:- Chain A: E.12, G.13, L.14, D.18, M.339
- Chain C: M.339, S.340
- Ligands: PEG.15, PEG.20
2 PLIP interactions:2 interactions with chain A- Water bridges: A:E.12, A:R.338
PEG.9: 7 residues within 4Å:- Chain B: E.41, S.42, R.144, P.148, S.149, L.150, N.151
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.41, B:E.41
PEG.10: 9 residues within 4Å:- Chain B: E.12, G.13, L.14, D.18, M.339
- Chain D: M.339, S.340
- Ligands: PEG.15, PEG.20
2 PLIP interactions:2 interactions with chain B- Water bridges: B:E.12, B:R.338
PEG.14: 7 residues within 4Å:- Chain C: E.41, S.42, R.144, P.148, S.149, L.150, N.151
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:E.41, C:E.41
PEG.15: 9 residues within 4Å:- Chain B: M.339, S.340
- Chain C: E.12, G.13, L.14, D.18, M.339
- Ligands: PEG.5, PEG.10
2 PLIP interactions:2 interactions with chain C- Water bridges: C:E.12, C:R.338
PEG.19: 7 residues within 4Å:- Chain D: E.41, S.42, R.144, P.148, S.149, L.150, N.151
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:E.41, D:E.41
PEG.20: 9 residues within 4Å:- Chain A: M.339, S.340
- Chain D: E.12, G.13, L.14, D.18, M.339
- Ligands: PEG.5, PEG.10
2 PLIP interactions:2 interactions with chain D- Water bridges: D:E.12, D:R.338
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, Y. et al., Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus Anthracis in the complex with inhibitor Oxanosine monophosphate. To Be Published
- Release Date
- 2018-10-24
- Peptides
- Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
BD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.54 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x JQS: 5-[(Z)-(aminomethylidene)amino]-1-(5-O-phosphono-beta-D-ribofuranosyl)-1H-imidazole-4-carboxylic acid(Non-covalent)
- 4 x K: POTASSIUM ION(Non-covalent)
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 8 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, Y. et al., Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus Anthracis in the complex with inhibitor Oxanosine monophosphate. To Be Published
- Release Date
- 2018-10-24
- Peptides
- Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
BD
B