SMTL ID : 6mmd.1

Photoactive Yellow Protein with 3,5-dichlorotyrosine substituted at position 42

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.23 Å

Oligo State

homo-dimer

Ligands

2 x HC4: 4'-HYDROXYCINNAMIC ACID(Covalent)

HC4.1: 14 residues within 4Å: Chain A: I.31, X.42, E.46, T.50, R.52, F.62, V.66, A.67, P.68, C.69, T.70, F.96, D.97, Y.98 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:T.50, A:F.62, A:V.66, A:A.67, A:F.96, A:F.96, A:F.96 Hydrogen bonds: A:E.46, A:T.50, A:T.50, A:C.69, A:Y.98 HC4.2: 15 residues within 4Å: Chain B: I.31, X.42, E.46, T.50, R.52, F.62, V.66, A.67, P.68, C.69, T.70, F.96, D.97, Y.98, V.122 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:T.50, B:F.62, B:V.66, B:A.67, B:F.96, B:F.96, B:F.96 Hydrogen bonds: B:E.46, B:T.50, B:C.69, B:Y.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thomson, B. et al., Perturbation of Short Hydrogen Bonds in Photoactive Yellow Protein via Noncanonical Amino Acid Incorporation. J.Phys.Chem.B (2019)

Release Date

2019-05-29

Peptides

Photoactive yellow protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Photoactive yellow protein

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