SMTL ID : 6mog.1

Dimeric DARPin C_R3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.21 Å

Oligo State

homo-dimer

Ligands

10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: N.38, T.40, T.46, D.69, A.72 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.69 Water bridges: A:S.73 EDO.2: 4 residues within 4Å: Chain A: H.82, A.105, Y.106 Ligands: EDO.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.106, A:Y.106 EDO.3: 5 residues within 4Å: Chain A: R.20, A.21, G.22, I.54, H.56 1 PLIP interactions: 1 interactions with chain A Water bridges: A:H.56 EDO.4: 6 residues within 4Å: Chain A: N.71, S.73, T.79, D.102, A.105 Ligands: EDO.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.73, A:D.102 Water bridges: A:Y.106 EDO.5: 4 residues within 4Å: Chain A: K.123, L.127, D.157, I.161 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.123 EDO.6: 5 residues within 4Å: Chain A: G.88, D.90, H.122, R.124, I.125 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.90 Water bridges: A:D.90, A:R.124 EDO.7: 3 residues within 4Å: Chain A: I.130, L.131, G.133 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.130 EDO.8: 5 residues within 4Å: Chain B: A.134, D.135, V.136, N.137, K.164 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:A.134, B:V.136, B:K.164 EDO.9: 6 residues within 4Å: Chain B: V.136, N.137, T.145, F.147, L.162, Q.163 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:V.136 EDO.10: 8 residues within 4Å: Chain B: N.104, Y.106, G.110, T.112, H.115, A.138, Q.139, D.140 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.110

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.11: 8 residues within 4Å: Chain B: M.87, G.88, H.89, D.90, H.122, K.123, R.124, I.125 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:K.123, B:R.124, B:R.124, B:R.124 Water bridges: B:D.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mohan, K. et al., Topological control of cytokine receptor signaling induces differential effects in hematopoiesis. Science (2019)

Release Date

2019-06-05

Peptides

DARPin C_R3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DARPin C_R3

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