SMTL ID : 6mp0.1

Crystal structures of the murine class I major histocompatibility complex H-2Db in complex with the TRP1-M9 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.319 No protein-ligand interaction detected (PLIP) NAG.2: 2 residues within 4Å: Chain A: N.363, N.399 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.399

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Clancy-Thompson, E. et al., Altered Binding of Tumor Antigenic Peptides to MHC Class I Affects CD8+T Cell-Effector Responses. Cancer Immunol Res (2018)

Release Date

2018-11-07

Peptides

TRP1-M9 peptide, Beta-2-microglobulin,H-2 class I histocompatibility antigen, D-B alpha chain, chimeric construct: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TRP1-M9 peptide, Beta-2-microglobulin,H-2 class I histocompatibility antigen, D-B alpha chain, chimeric construct