SMTL ID : 6mq9.4 (5 other biounits)

Crystal Structure of GTPase Domain of Human Septin 12 in complex with GMPPNP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.86 Å

Oligo State

monomer

Ligands

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)

GNP.1: 16 residues within 4Å: Chain A: S.33, G.34, L.35, G.36, K.37, S.38, T.39, Q.63, T.64, G.90, R.170, D.172, V.225, G.226, R.241 Ligands: MG.2 27 PLIP interactions: 27 interactions with chain A Hydrogen bonds: A:S.33, A:G.34, A:L.35, A:G.36, A:K.37, A:K.37, A:S.38, A:T.39, A:T.39, A:Q.63, A:T.64, A:T.64, A:G.90, A:R.170, A:G.226, A:R.241, A:R.241 Water bridges: A:S.33, A:S.38, A:S.38, A:T.39, A:T.64, A:D.228, A:R.241 Salt bridges: A:D.172 pi-Cation interactions: A:R.241, A:R.241

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: S.38, T.64, D.87 Ligands: GNP.1 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.38, A:T.64, H2O.2, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Castro, D.K.S.D.V. et al., A complete compendium of crystal structures for the human SEPT3 subgroup reveals functional plasticity at a specific septin interface. Iucrj (2020)

Release Date

2019-11-20

Peptides

Septin-12: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Septin-12

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