SMTL ID : 6mqs.2 (1 other biounit)

Vaccine-elicited NHP FP-targeting HIV neutralizing antibody A12V163-a.01 in complex with HIV fusion peptide (residue 512-519)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ALA- VAL- GLY- ILE- GLY- ALA- VAL: HIV fusion peptide residue 512-519(Non-covalent)

ALA-VAL-GLY-ILE-GLY-ALA-VAL.1: 16 residues within 4Å: Chain A: Y.34, S.36, W.48, Y.51, E.100, G.101, V.102, D.110 Chain B: Q.35, Y.37, L.47, Y.50, E.51, Q.90, Y.92, H.99 9 PLIP interactions: 5 interactions with chain B, 4 interactions with chain A Hydrophobic interactions: B:Y.50, B:Y.92, B:Y.92, A:Y.34, A:Y.51 Hydrogen bonds: B:E.51, B:E.51, A:Y.51, A:Y.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kong, R. et al., Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization. Cell (2019)

Release Date

2019-07-31

Peptides

antibody A12V163-a.01 heavy chain: A
antibody A12V163-a.01 light chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

antibody A12V163-a.01 heavy chain

antibody A12V163-a.01 light chain

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