SMTL ID : 6mqz.1 (1 other biounit)

Crystal Structure of the 13-cis Product of the All-trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E Mutant of Human Cellular Retinoic Acid Binding Protein II Irradiated with 400 nm Laser (5 minutes) at 2.07 Angstrom

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: P.1, Q.45, E.46, G.47 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:P.1, A:G.47

1 x RET: RETINAL(Covalent)

RET.2: 12 residues within 4Å: Chain A: F.15, A.36, Y.39, V.54, T.56, I.63, V.76, W.109, K.111, E.121, M.123, Q.132 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.36, A:Y.39, A:Y.39, A:T.56, A:V.76, A:W.109, A:W.109, A:K.111, A:E.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ghanbarpour, A. et al., Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc. (2019)

Release Date

2019-01-09

Peptides

Cellular retinoic acid-binding protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cellular retinoic acid-binding protein 2

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