- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 11 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 4 residues within 4Å:- Chain A: W.100, R.118, R.132, K.506
3 PLIP interactions:3 interactions with chain A- Salt bridges: A:R.118, A:R.132, A:K.506
SO4.3: 5 residues within 4Å:- Chain A: Q.290, K.471
- Chain B: W.485, H.486, H.487
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:Q.290, B:H.487
- Water bridges: A:K.471
- Salt bridges: A:K.471
SO4.4: 2 residues within 4Å:- Chain A: R.368, Y.371
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Y.371
- Salt bridges: A:R.368
SO4.5: 2 residues within 4Å:- Chain A: R.128, K.129
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:K.129
- Salt bridges: A:R.128
SO4.6: 1 residues within 4Å:- Chain A: R.141
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:R.141
SO4.10: 5 residues within 4Å:- Chain A: W.485, H.486, H.487
- Chain B: Q.290, K.471
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:Q.290, A:H.487
- Water bridges: B:K.471
- Salt bridges: B:K.471
SO4.11: 4 residues within 4Å:- Chain B: W.100, R.118, R.132, K.506
4 PLIP interactions:4 interactions with chain B- Water bridges: B:K.506
- Salt bridges: B:R.118, B:R.132, B:K.506
SO4.12: 1 residues within 4Å:- Chain B: K.455
1 PLIP interactions:1 interactions with chain B- Salt bridges: B:K.455
SO4.13: 2 residues within 4Å:- Chain B: R.368, Y.371
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Y.371
- Salt bridges: B:R.368
SO4.14: 3 residues within 4Å:- Chain B: P.62, T.83, H.360
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:T.83
- Water bridges: B:L.348
- Salt bridges: B:H.360
SO4.15: 6 residues within 4Å:- Chain B: D.380, Q.415, K.429, I.433, E.435, K.441
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:Q.415
- Water bridges: B:N.518
- Salt bridges: B:K.429, B:K.441
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.7: 5 residues within 4Å:- Chain A: R.204, G.226, T.227, G.228, H.508
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:R.204, A:R.204, A:T.227, A:G.228, A:H.508
- Water bridges: A:G.226, A:G.228
GOL.16: 6 residues within 4Å:- Chain B: R.204, E.207, G.226, T.227, G.228, H.508
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:R.204, B:E.207, B:T.227, B:G.228
- Water bridges: B:H.508
- 2 x IMD: IMIDAZOLE(Non-covalent)
IMD.8: 6 residues within 4Å:- Chain A: K.169, H.170, Y.171, P.182, L.183, S.191
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:L.183, A:L.183, A:S.191
- pi-Stacking: A:Y.171
IMD.17: 6 residues within 4Å:- Chain B: K.169, H.170, Y.171, P.182, L.183, S.191
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:H.170, B:L.183, B:L.183, B:S.191
- pi-Stacking: B:Y.171
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zanphorlin, L.M. et al., Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43. Biotechnol. Bioeng. (2019)
- Release Date
- 2019-04-17
- Peptides
- Glycoside Hydrolase Family 43: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 11 x SO4: SULFATE ION(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 2 x IMD: IMIDAZOLE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zanphorlin, L.M. et al., Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43. Biotechnol. Bioeng. (2019)
- Release Date
- 2019-04-17
- Peptides
- Glycoside Hydrolase Family 43: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B