SMTL ID : 6muj.1 (4 other biounits)

Formylglycine generating enzyme bound to copper

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: N.199, I.200, D.213, H.215 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:I.200, A:D.213, A:H.215, H2O.1, H2O.2

4 x CU: COPPER (II) ION(Non-covalent)

CU.2: 4 residues within 4Å: Chain A: W.239, C.277, C.282, R.284 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.277, A:C.282, A:C.282 CU.3: 2 residues within 4Å: Chain A: H.215, T.218 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.215 CU.4: 1 residues within 4Å: Chain A: H.86 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.86 CU.5: 4 residues within 4Å: Chain A: H.100, L.101, P.206, H.207 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.100, A:H.207

1 x IMD: IMIDAZOLE(Non-covalent)

IMD.6: 3 residues within 4Å: Chain A: Y.49, Y.281, R.284 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.284, A:R.284 pi-Stacking: A:Y.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Appel, M.J. et al., Formylglycine-generating enzyme binds substrate directly at a mononuclear Cu(I) center to initiate O2activation. Proc. Natl. Acad. Sci. U.S.A. (2019)

Release Date

2019-02-27

Peptides

Formylglycine-generating enzyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Formylglycine-generating enzyme

Related Entries With Identical Sequence