SMTL ID : 6mvg.1 (2 other biounits)

Crystal structure of FMN-binding beta-glucuronidase from Ruminococcus gnavus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 9 residues within 4Å: Chain A: D.179, Y.182, Y.183, G.187, K.189, F.206, K.382, Y.389, M.427 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:K.189, A:Y.389 Hydrogen bonds: A:D.179, A:Y.182, A:G.187 Salt bridges: A:K.382 pi-Stacking: A:Y.182, A:F.206, A:F.206

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: D.64, D.67, G.68, D.71, D.544 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.64, A:G.68, A:D.71, A:D.544, A:D.544

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pellock, S.J. et al., Discovery and Characterization of FMN-Binding beta-Glucuronidases in the Human Gut Microbiome. J. Mol. Biol. (2019)

Release Date

2019-01-30

Peptides

beta-glucuronidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

beta-glucuronidase

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