SMTL ID : 6mwh.1

LasR LBD:BB0020 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x K5D: 2-(3-bromophenoxy)-N-[(1S,2S,3R,5S)-2-hydroxybicyclo[3.1.0]hexan-3-yl]acetamide(Non-covalent)

K5D.1: 19 residues within 4Å: Chain A: G.38, L.39, L.40, Y.47, A.50, Y.56, W.60, D.73, T.75, V.76, C.79, W.88, Y.93, F.101, A.105, L.110, G.126, A.127, S.129 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.47, A:V.76, A:W.88, A:W.88, A:W.88, A:F.101, A:A.105, A:L.110 Hydrogen bonds: A:D.73, A:T.75, A:S.129 K5D.2: 13 residues within 4Å: Chain B: G.38, L.40, Y.56, W.60, Y.64, D.73, T.75, V.76, W.88, Y.93, A.105, A.127, S.129 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:T.75, B:V.76, B:W.88, B:A.105 Hydrogen bonds: B:Y.56, B:Y.64, B:D.73, B:T.75, B:S.129, B:S.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Paczkowski, J.E. et al., An Autoinducer Analogue Reveals an Alternative Mode of Ligand Binding for the LasR Quorum-Sensing Receptor. Acs Chem.Biol. (2019)

Release Date

2019-04-03

Peptides

Transcriptional regulator LasR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transcriptional regulator LasR

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