SMTL ID : 6mww.1

LasR LBD:BB0126 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.76 Å

Oligo State

homo-dimer

Ligands

2 x K5J: 4-[3-(methylsulfonyl)phenoxy]-N-[(1R,3R,5R)-2-oxobicyclo[3.1.0]hexan-3-yl]butanamide(Non-covalent)

K5J.1: 24 residues within 4Å: Chain A: L.36, G.38, L.39, L.40, Y.47, A.50, I.52, Y.56, W.60, Y.64, D.73, T.75, V.76, C.79, W.88, Y.93, F.101, A.105, L.110, T.115, L.125, G.126, A.127, S.129 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:Y.47, A:Y.56, A:W.60, A:W.88, A:F.101, A:F.101, A:A.105, A:L.110, A:T.115, A:L.125 Hydrogen bonds: A:D.73, A:T.75, A:T.115, A:S.129 K5J.2: 24 residues within 4Å: Chain B: L.36, G.38, L.39, L.40, Y.47, A.50, I.52, Y.56, W.60, Y.64, D.73, T.75, V.76, C.79, W.88, Y.93, F.101, A.105, L.110, T.115, L.125, G.126, A.127, S.129 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:L.40, B:Y.47, B:Y.56, B:W.60, B:W.88, B:F.101, B:F.101, B:A.105, B:L.110, B:T.115, B:L.125 Hydrogen bonds: B:Y.56, B:D.73, B:S.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Paczkowski, J.E. et al., An Autoinducer Analogue Reveals an Alternative Mode of Ligand Binding for the LasR Quorum-Sensing Receptor. Acs Chem.Biol. (2019)

Release Date

2019-04-03

Peptides

Transcriptional regulator LasR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transcriptional regulator LasR

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