SMTL ID : 6n0b.2 (1 other biounit)

Structure of GTPase Domain of Human Septin 7 at High Resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

homo-dimer

Ligands

2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 18 residues within 4Å: Chain A: S.26, G.27, L.28, G.29, K.30, S.31, T.32, K.162, D.164, T.165, V.216, G.217, R.232, Y.234 Chain B: S.135, H.137, T.165, E.170 24 PLIP interactions: 20 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:S.26, A:G.27, A:L.28, A:G.29, A:K.30, A:S.31, A:S.31, A:T.32, A:T.32, A:K.162, A:G.217, A:R.232, A:R.232, B:T.165 Water bridges: A:K.30, A:S.31, A:S.31, A:K.162, B:H.137 Salt bridges: A:K.30, A:D.164, B:H.137, B:H.137 pi-Cation interactions: A:R.232 GDP.2: 18 residues within 4Å: Chain A: S.135, H.137, T.165, E.170 Chain B: S.26, G.27, L.28, G.29, K.30, S.31, T.32, S.51, K.162, D.164, V.216, G.217, R.232, Y.234 27 PLIP interactions: 23 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:G.27, B:L.28, B:G.29, B:K.30, B:S.31, B:S.31, B:T.32, B:T.32, B:S.51, B:S.51, B:K.162, B:G.217, B:R.232, B:R.232, B:Y.234, A:T.165 Water bridges: B:S.31, B:S.31, B:S.31, B:S.31, B:K.162, A:G.136 Salt bridges: B:K.30, B:D.164, A:H.137, A:H.137 pi-Cation interactions: B:R.232

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brognara, G. et al., Revisiting SEPT7 and the slippage of beta-strands in the septin family. J.Struct.Biol. (2019)

Release Date

2019-05-01

Peptides

Septin-7: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Septin-7

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