SMTL ID : 6n1o.2 (4 other biounits)

Oxidized rat cytochrome c mutant (S47E)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x HEC: HEME C(Covalent)

HEC.1: 27 residues within 4Å: Chain A: K.13, C.14, C.17, H.18, T.28, G.29, P.30, L.32, L.35, T.40, G.41, F.46, Y.48, T.49, N.52, W.59, L.64, Y.67, L.68, T.78, K.79, M.80, I.81, F.82, I.85, L.94, L.98 23 PLIP interactions: 23 interactions with chain A, Hydrophobic interactions: A:T.28, A:L.32, A:L.35, A:F.46, A:W.59, A:L.64, A:L.68, A:M.80, A:F.82, A:I.85, A:L.98 Hydrogen bonds: A:G.41, A:Y.48, A:T.49, A:N.52, A:N.52, A:K.79 Water bridges: A:R.38, A:Q.42, A:T.78 Salt bridges: A:K.79 pi-Stacking: A:Y.67 Metal complexes: A:H.18

2 x FC6: HEXACYANOFERRATE(3-)(Non-covalent)

FC6.2: 4 residues within 4Å: Chain A: K.87, K.88, G.89, E.90 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.88, A:G.89, A:E.90 FC6.3: 2 residues within 4Å: Chain A: K.86, K.87 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kalpage, H.A. et al., Serine-47 phosphorylation of cytochromecin the mammalian brain regulates cytochromecoxidase and caspase-3 activity. Faseb J. (2019)

Release Date

2019-10-23

Peptides

Cytochrome c, somatic: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Cytochrome c, somatic

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