SMTL ID : 6n33.1

Crystal structure of fms kinase domain with a small molecular inhibitor, PLX5622

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x 622: 6-fluoro-N-[(5-fluoro-2-methoxypyridin-3-yl)methyl]-5-[(5-methyl-1H-pyrrolo[2,3-b]pyridin-3-yl)methyl]pyridin-2-amine(Non-covalent)

622.1: 16 residues within 4Å: Chain A: L.58, A.84, K.86, E.103, M.107, V.117, T.133, E.134, Y.135, C.136, L.193, L.209, I.218, G.219, D.220, F.221 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.58, A:T.133, A:L.209, A:F.221 Hydrogen bonds: A:E.103, A:E.103, A:T.133, A:E.134, A:C.136, A:D.220

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Spangenberg, E. et al., Sustained microglial depletion with CSF1R inhibitor impairs parenchymal plaque development in an Alzheimer's disease model. Nat Commun (2019)

Release Date

2019-09-18

Peptides

Macrophage colony-stimulating factor 1 receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Macrophage colony-stimulating factor 1 receptor

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