SMTL ID : 6ne6.1

Crystal Structure of heterotrimeric G-protein alpha subunit Galpha7 from Naegleria fowleri

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 2 residues within 4Å: Chain A: H.5, H.7 1 PLIP interactions: 1 interactions with chain A Water bridges: A:H.5 NA.2: 3 residues within 4Å: Chain A: H.4, H.6, H.193 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.193

7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 6 residues within 4Å: Chain A: D.19, Q.126, I.127, E.128, R.157, R.221 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:D.19, A:D.19, A:Q.126, A:R.221, A:R.221 Water bridges: A:I.127, A:Q.211, A:Q.211 EDO.4: 4 residues within 4Å: Chain A: I.71, S.72, T.73, E.74 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.72, A:E.74, A:E.74 EDO.5: 7 residues within 4Å: Chain A: Y.50, E.51, I.90, D.95, K.96, V.97, W.98 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.95, A:V.97, A:W.98 EDO.6: 6 residues within 4Å: Chain A: A.103, Q.104, A.107, L.138, D.139, G.142 1 PLIP interactions: 1 interactions with chain A Water bridges: A:D.139 EDO.7: 4 residues within 4Å: Chain A: E.215, D.216, D.217, S.218 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.218 EDO.8: 3 residues within 4Å: Chain A: N.34, N.35, G.36 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.36 Water bridges: A:N.34 EDO.9: 6 residues within 4Å: Chain A: I.61, K.65, R.77, A.80, E.81, E.84 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.65, A:E.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dranow, D.M. et al., Crystal Structure of heterotrimeric G-protein alpha subunit Galpha7 from Naegleria fowleri. To Be Published

Release Date

2019-12-18

Peptides

G-protein alpha subunit Galpha7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

G-protein alpha subunit Galpha7