SMTL ID : 6nf6.1

Structure of chicken Otop3 in nanodiscs

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x Y01: CHOLESTEROL HEMISUCCINATE(Non-covalent)

Y01.1: 8 residues within 4Å: Chain A: K.52, L.56, G.59, L.63, V.66, S.70, L.207 Chain B: L.390 8 PLIP interactions: 7 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:K.52, A:L.56, A:L.63, A:V.66, A:V.66, A:L.207, B:L.390 Salt bridges: A:K.52 Y01.2: 8 residues within 4Å: Chain A: L.390, I.435 Chain B: K.52, L.56, G.59, L.63, V.66, L.207 7 PLIP interactions: 6 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:K.52, B:L.56, B:L.63, B:V.66, B:L.207, A:L.390 Salt bridges: B:K.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saotome, K. et al., Structures of the otopetrin proton channels Otop1 and Otop3. Nat.Struct.Mol.Biol. (2019)

Release Date

2019-06-05

Peptides

Otopetrin3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Otopetrin3