SMTL ID : 6nih.2 (1 other biounit)

Crystal structure of human TLR1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-NAG.1: 7 residues within 4Å: Chain A: Y.275, K.300, A.301, N.330, H.352, T.376, Q.402 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 9 residues within 4Å: Chain A: Q.380, S.406, Q.407, N.429, S.431, S.432, V.449, D.451, H.453 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.453 Water bridges: A:S.432

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 8 residues within 4Å: Chain A: L.28, S.32, K.33, I.49, N.51, S.53, Q.54, I.75 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.75 Hydrogen bonds: A:S.32, A:K.33, A:N.51 NAG.4: 4 residues within 4Å: Chain A: N.163, N.188, E.190, T.212 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Su, L. et al., Structural Basis of TLR2/TLR1 Activation by the Synthetic Agonist Diprovocim. J. Med. Chem. (2019)

Release Date

2019-04-17

Peptides

Toll-like receptor 1,Variable lymphocyte receptor B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Toll-like receptor 1,Variable lymphocyte receptor B

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