SMTL ID : 6nk7.2 (1 other biounit)

Electron Cryo-Microscopy of Chikungunya in Complex with Mouse Mxra8 Receptor

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-4-4-4-4-1-mer

Ligands

5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: E.32, R.134, N.141 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.141 NAG.2: 4 residues within 4Å: Chain B: R.134, L.136, G.139, N.141 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.141 NAG.3: 5 residues within 4Å: Chain C: E.30, E.32, R.134, L.136, N.141 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:E.32, C:N.141 NAG.4: 4 residues within 4Å: Chain D: E.30, R.134, L.136, N.141 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:N.141 NAG.5: 2 residues within 4Å: Chain Q: N.87, L.151 1 PLIP interactions: 1 interactions with chain Q Hydrogen bonds: Q:N.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Basore, K. et al., Cryo-EM Structure of Chikungunya Virus in Complex with the Mxra8 Receptor. Cell (2019)

Release Date

2019-05-22

Peptides

E1 glycoprotein: ABCD
E2 glycoprotein: EFGH
Capsid protein: IJKL
E3 glycoprotein: MNOP
Matrix remodeling-associated protein 8: Q

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

M
U

N
V

O
W

P
X

Q
N

E1 glycoprotein

E2 glycoprotein

Capsid protein

E3 glycoprotein

Matrix remodeling-associated protein 8

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