SMTL ID : 6nlg.1

1.50 A resolution structure of BfrB (C89S/K96C) from Pseudomonas aeruginosa in complex with a small molecule fragment (analog 1)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-24-mer

Ligands

18 x KT7: 5-hydroxy-1H-isoindole-1,3(2H)-dione(Non-covalent)

KT7.1: 8 residues within 4Å: Chain A: L.68, P.69, N.70, L.71, Q.72 Chain B: L.27, L.77, I.79 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:P.69, A:L.71, A:Q.72 Hydrophobic interactions: B:I.79, B:I.79 KT7.12: 8 residues within 4Å: Chain C: L.68, P.69, N.70, L.71, Q.72 Chain W: L.27, L.77, I.79 5 PLIP interactions: 3 interactions with chain C, 2 interactions with chain W Hydrogen bonds: C:P.69, C:L.71, C:Q.72 Hydrophobic interactions: W:I.79, W:I.79 KT7.18: 8 residues within 4Å: Chain D: L.68, P.69, N.70, L.71, Q.72 Chain T: L.27, L.77, I.79 6 PLIP interactions: 3 interactions with chain T, 3 interactions with chain D Hydrophobic interactions: T:I.79, T:I.79 Water bridges: T:I.79 Hydrogen bonds: D:P.69, D:L.71, D:Q.72 KT7.23: 8 residues within 4Å: Chain E: L.68, P.69, N.70, L.71, Q.72 Chain F: L.27, L.77, I.79 5 PLIP interactions: 3 interactions with chain E, 2 interactions with chain F Hydrogen bonds: E:P.69, E:L.71, E:Q.72 Hydrophobic interactions: F:I.79, F:I.79 KT7.34: 8 residues within 4Å: Chain G: L.68, P.69, N.70, L.71, Q.72 Chain S: L.27, L.77, I.79 5 PLIP interactions: 2 interactions with chain S, 3 interactions with chain G Hydrophobic interactions: S:I.79, S:I.79 Hydrogen bonds: G:P.69, G:L.71, G:Q.72 KT7.40: 8 residues within 4Å: Chain H: L.68, P.69, N.70, L.71, Q.72 Chain P: L.27, L.77, I.79 6 PLIP interactions: 3 interactions with chain H, 3 interactions with chain P Hydrogen bonds: H:P.69, H:L.71, H:Q.72 Hydrophobic interactions: P:I.79, P:I.79 Water bridges: P:I.79 KT7.45: 8 residues within 4Å: Chain I: L.68, P.69, N.70, L.71, Q.72 Chain J: L.27, L.77, I.79 5 PLIP interactions: 2 interactions with chain J, 3 interactions with chain I Hydrophobic interactions: J:I.79, J:I.79 Hydrogen bonds: I:P.69, I:L.71, I:Q.72 KT7.56: 8 residues within 4Å: Chain K: L.68, P.69, N.70, L.71, Q.72 Chain O: L.27, L.77, I.79 5 PLIP interactions: 3 interactions with chain K, 2 interactions with chain O Hydrogen bonds: K:P.69, K:L.71, K:Q.72 Hydrophobic interactions: O:I.79, O:I.79 KT7.62: 8 residues within 4Å: Chain L: L.68, P.69, N.70, L.71, Q.72 Chain X: L.27, L.77, I.79 6 PLIP interactions: 3 interactions with chain L, 3 interactions with chain X Hydrogen bonds: L:P.69, L:L.71, L:Q.72 Hydrophobic interactions: X:I.79, X:I.79 Water bridges: X:I.79 KT7.67: 8 residues within 4Å: Chain M: L.68, P.69, N.70, L.71, Q.72 Chain N: L.27, L.77, I.79 5 PLIP interactions: 2 interactions with chain N, 3 interactions with chain M Hydrophobic interactions: N:I.79, N:I.79 Hydrogen bonds: M:P.69, M:L.71, M:Q.72 KT7.78: 8 residues within 4Å: Chain K: L.27, L.77, I.79 Chain O: L.68, P.69, N.70, L.71, Q.72 5 PLIP interactions: 2 interactions with chain K, 3 interactions with chain O Hydrophobic interactions: K:I.79, K:I.79 Hydrogen bonds: O:P.69, O:L.71, O:Q.72 KT7.84: 8 residues within 4Å: Chain H: L.27, L.77, I.79 Chain P: L.68, P.69, N.70, L.71, Q.72 6 PLIP interactions: 3 interactions with chain P, 3 interactions with chain H Hydrogen bonds: P:P.69, P:L.71, P:Q.72 Hydrophobic interactions: H:I.79, H:I.79 Water bridges: H:I.79 KT7.89: 8 residues within 4Å: Chain Q: L.68, P.69, N.70, L.71, Q.72 Chain R: L.27, L.77, I.79 5 PLIP interactions: 3 interactions with chain Q, 2 interactions with chain R Hydrogen bonds: Q:P.69, Q:L.71, Q:Q.72 Hydrophobic interactions: R:I.79, R:I.79 KT7.100: 8 residues within 4Å: Chain G: L.27, L.77, I.79 Chain S: L.68, P.69, N.70, L.71, Q.72 5 PLIP interactions: 3 interactions with chain S, 2 interactions with chain G Hydrogen bonds: S:P.69, S:L.71, S:Q.72 Hydrophobic interactions: G:I.79, G:I.79 KT7.106: 8 residues within 4Å: Chain D: L.27, L.77, I.79 Chain T: L.68, P.69, N.70, L.71, Q.72 6 PLIP interactions: 3 interactions with chain T, 3 interactions with chain D Hydrogen bonds: T:P.69, T:L.71, T:Q.72 Hydrophobic interactions: D:I.79, D:I.79 Water bridges: D:I.79 KT7.111: 8 residues within 4Å: Chain U: L.68, P.69, N.70, L.71, Q.72 Chain V: L.27, L.77, I.79 5 PLIP interactions: 2 interactions with chain V, 3 interactions with chain U Hydrophobic interactions: V:I.79, V:I.79 Hydrogen bonds: U:P.69, U:L.71, U:Q.72 KT7.122: 8 residues within 4Å: Chain C: L.27, L.77, I.79 Chain W: L.68, P.69, N.70, L.71, Q.72 5 PLIP interactions: 3 interactions with chain W, 2 interactions with chain C Hydrogen bonds: W:P.69, W:L.71, W:Q.72 Hydrophobic interactions: C:I.79, C:I.79 KT7.128: 8 residues within 4Å: Chain L: L.27, L.77, I.79 Chain X: L.68, P.69, N.70, L.71, Q.72 6 PLIP interactions: 3 interactions with chain L, 3 interactions with chain X Hydrophobic interactions: L:I.79, L:I.79 Water bridges: L:I.79 Hydrogen bonds: X:P.69, X:L.71, X:Q.72

18 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.2: 18 residues within 4Å: Chain A: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53 Chain B: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 18 PLIP interactions: 9 interactions with chain B, 9 interactions with chain A, Hydrophobic interactions: B:L.19, B:I.22, B:F.26, B:F.26, B:M.52, B:A.55, B:I.59, A:L.19, A:I.22, A:I.22, A:F.26, A:F.26, A:I.49, A:M.52 Water bridges: B:K.53, A:Y.45 Salt bridges: B:K.53, A:K.53 HEM.13: 21 residues within 4Å: Chain C: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, L.71 Chain W: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 Ligands: HEM.123 20 PLIP interactions: 12 interactions with chain W, 8 interactions with chain C, Hydrophobic interactions: W:L.19, W:I.22, W:I.22, W:F.26, W:F.26, W:I.49, W:M.52, W:A.55, W:I.59, C:L.19, C:I.22, C:F.26, C:I.49, C:M.52, C:A.55, C:L.71 Water bridges: W:Y.45, W:Y.45 Salt bridges: W:K.53, C:K.53 HEM.19: 19 residues within 4Å: Chain D: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, I.59 Chain T: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, L.71 Ligands: HEM.107 18 PLIP interactions: 10 interactions with chain T, 8 interactions with chain D, Hydrophobic interactions: T:L.19, T:I.22, T:F.26, T:F.26, T:I.49, T:I.49, T:M.52, T:L.71, D:L.19, D:I.22, D:I.22, D:F.26, D:F.26, D:M.52, D:I.59 Water bridges: T:Y.45 Salt bridges: T:K.53, D:K.53 HEM.24: 18 residues within 4Å: Chain E: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53 Chain F: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 18 PLIP interactions: 9 interactions with chain F, 9 interactions with chain E, Hydrophobic interactions: F:L.19, F:I.22, F:F.26, F:F.26, F:M.52, F:A.55, F:I.59, E:L.19, E:I.22, E:I.22, E:F.26, E:F.26, E:I.49, E:M.52 Water bridges: F:K.53, E:Y.45 Salt bridges: F:K.53, E:K.53 HEM.35: 21 residues within 4Å: Chain G: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, L.71 Chain S: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 Ligands: HEM.101 20 PLIP interactions: 8 interactions with chain G, 12 interactions with chain S, Hydrophobic interactions: G:L.19, G:I.22, G:F.26, G:I.49, G:M.52, G:A.55, G:L.71, S:L.19, S:I.22, S:I.22, S:F.26, S:F.26, S:I.49, S:M.52, S:A.55, S:I.59 Salt bridges: G:K.53, S:K.53 Water bridges: S:Y.45, S:Y.45 HEM.41: 19 residues within 4Å: Chain H: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, I.59 Chain P: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, L.71 Ligands: HEM.85 18 PLIP interactions: 10 interactions with chain P, 8 interactions with chain H, Hydrophobic interactions: P:L.19, P:I.22, P:F.26, P:F.26, P:I.49, P:I.49, P:M.52, P:L.71, H:L.19, H:I.22, H:I.22, H:F.26, H:F.26, H:M.52, H:I.59 Water bridges: P:Y.45 Salt bridges: P:K.53, H:K.53 HEM.46: 18 residues within 4Å: Chain I: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53 Chain J: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 18 PLIP interactions: 9 interactions with chain J, 9 interactions with chain I, Hydrophobic interactions: J:L.19, J:I.22, J:F.26, J:F.26, J:M.52, J:A.55, J:I.59, I:L.19, I:I.22, I:I.22, I:F.26, I:F.26, I:I.49, I:M.52 Water bridges: J:K.53, I:Y.45 Salt bridges: J:K.53, I:K.53 HEM.57: 21 residues within 4Å: Chain K: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, L.71 Chain O: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 Ligands: HEM.79 20 PLIP interactions: 12 interactions with chain O, 8 interactions with chain K, Hydrophobic interactions: O:L.19, O:I.22, O:I.22, O:F.26, O:F.26, O:I.49, O:M.52, O:A.55, O:I.59, K:L.19, K:I.22, K:F.26, K:I.49, K:M.52, K:A.55, K:L.71 Water bridges: O:Y.45, O:Y.45 Salt bridges: O:K.53, K:K.53 HEM.63: 19 residues within 4Å: Chain L: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, I.59 Chain X: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, L.71 Ligands: HEM.129 18 PLIP interactions: 10 interactions with chain X, 8 interactions with chain L, Hydrophobic interactions: X:L.19, X:I.22, X:F.26, X:F.26, X:I.49, X:I.49, X:M.52, X:L.71, L:L.19, L:I.22, L:I.22, L:F.26, L:F.26, L:M.52, L:I.59 Water bridges: X:Y.45 Salt bridges: X:K.53, L:K.53 HEM.68: 18 residues within 4Å: Chain M: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53 Chain N: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 19 PLIP interactions: 10 interactions with chain M, 9 interactions with chain N, Hydrophobic interactions: M:L.19, M:I.22, M:I.22, M:F.26, M:F.26, M:I.49, M:M.52, N:L.19, N:I.22, N:F.26, N:F.26, N:M.52, N:A.55, N:I.59 Water bridges: M:Y.45, M:Y.45, N:K.53 Salt bridges: M:K.53, N:K.53 HEM.79: 21 residues within 4Å: Chain K: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 Chain O: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, L.71 Ligands: HEM.57 19 PLIP interactions: 8 interactions with chain O, 11 interactions with chain K, Hydrophobic interactions: O:L.19, O:I.22, O:F.26, O:I.49, O:M.52, O:A.55, O:L.71, K:L.19, K:I.22, K:I.22, K:F.26, K:F.26, K:I.49, K:M.52, K:A.55, K:I.59 Salt bridges: O:K.53, K:K.53 Water bridges: K:Y.45 HEM.85: 19 residues within 4Å: Chain H: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, L.71 Chain P: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, I.59 Ligands: HEM.41 17 PLIP interactions: 8 interactions with chain P, 9 interactions with chain H, Hydrophobic interactions: P:L.19, P:I.22, P:I.22, P:F.26, P:F.26, P:M.52, P:I.59, H:L.19, H:I.22, H:F.26, H:F.26, H:I.49, H:I.49, H:M.52, H:L.71 Salt bridges: P:K.53, H:K.53 HEM.90: 18 residues within 4Å: Chain Q: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53 Chain R: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 19 PLIP interactions: 9 interactions with chain R, 10 interactions with chain Q, Hydrophobic interactions: R:L.19, R:I.22, R:F.26, R:F.26, R:M.52, R:A.55, R:I.59, Q:L.19, Q:I.22, Q:I.22, Q:F.26, Q:F.26, Q:I.49, Q:M.52 Water bridges: R:K.53, Q:Y.45, Q:Y.45 Salt bridges: R:K.53, Q:K.53 HEM.101: 21 residues within 4Å: Chain G: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 Chain S: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, L.71 Ligands: HEM.35 19 PLIP interactions: 11 interactions with chain G, 8 interactions with chain S, Hydrophobic interactions: G:L.19, G:I.22, G:I.22, G:F.26, G:F.26, G:I.49, G:M.52, G:A.55, G:I.59, S:L.19, S:I.22, S:F.26, S:I.49, S:M.52, S:A.55, S:L.71 Water bridges: G:Y.45 Salt bridges: G:K.53, S:K.53 HEM.107: 19 residues within 4Å: Chain D: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, L.71 Chain T: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, I.59 Ligands: HEM.19 17 PLIP interactions: 9 interactions with chain D, 8 interactions with chain T, Hydrophobic interactions: D:L.19, D:I.22, D:F.26, D:F.26, D:I.49, D:I.49, D:M.52, D:L.71, T:L.19, T:I.22, T:I.22, T:F.26, T:F.26, T:M.52, T:I.59 Salt bridges: D:K.53, T:K.53 HEM.112: 18 residues within 4Å: Chain U: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53 Chain V: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 19 PLIP interactions: 10 interactions with chain U, 9 interactions with chain V, Hydrophobic interactions: U:L.19, U:I.22, U:I.22, U:F.26, U:F.26, U:I.49, U:M.52, V:L.19, V:I.22, V:F.26, V:F.26, V:M.52, V:A.55, V:I.59 Water bridges: U:Y.45, U:Y.45, V:K.53 Salt bridges: U:K.53, V:K.53 HEM.123: 21 residues within 4Å: Chain C: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, I.59 Chain W: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, A.55, L.71 Ligands: HEM.13 19 PLIP interactions: 11 interactions with chain C, 8 interactions with chain W, Hydrophobic interactions: C:L.19, C:I.22, C:I.22, C:F.26, C:F.26, C:I.49, C:M.52, C:A.55, C:I.59, W:L.19, W:I.22, W:F.26, W:I.49, W:M.52, W:A.55, W:L.71 Water bridges: C:Y.45 Salt bridges: C:K.53, W:K.53 HEM.129: 19 residues within 4Å: Chain L: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, L.71 Chain X: L.19, I.22, N.23, F.26, Y.45, I.49, M.52, K.53, I.59 Ligands: HEM.63 17 PLIP interactions: 8 interactions with chain X, 9 interactions with chain L, Hydrophobic interactions: X:L.19, X:I.22, X:I.22, X:F.26, X:F.26, X:M.52, X:I.59, L:L.19, L:I.22, L:F.26, L:F.26, L:I.49, L:I.49, L:M.52, L:L.71 Salt bridges: X:K.53, L:K.53

24 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.3: 10 residues within 4Å: Chain A: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Chain D: R.102, E.128 Ligand excluded by PLIP MPD.9: 8 residues within 4Å: Chain B: K.2, G.3, D.4, L.65, V.111, H.112, D.113 Chain F: R.102 Ligand excluded by PLIP MPD.14: 10 residues within 4Å: Chain C: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Chain Q: R.102, E.128 Ligand excluded by PLIP MPD.20: 9 residues within 4Å: Chain D: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Chain S: R.102 Ligand excluded by PLIP MPD.25: 10 residues within 4Å: Chain E: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Chain H: R.102, E.128 Ligand excluded by PLIP MPD.31: 8 residues within 4Å: Chain F: K.2, G.3, D.4, L.65, V.111, H.112, D.113 Chain J: R.102 Ligand excluded by PLIP MPD.36: 10 residues within 4Å: Chain G: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Chain M: R.102, E.128 Ligand excluded by PLIP MPD.42: 9 residues within 4Å: Chain H: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Chain O: R.102 Ligand excluded by PLIP MPD.47: 10 residues within 4Å: Chain I: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Chain L: R.102, E.128 Ligand excluded by PLIP MPD.53: 8 residues within 4Å: Chain B: R.102 Chain J: K.2, G.3, D.4, L.65, V.111, H.112, D.113 Ligand excluded by PLIP MPD.58: 10 residues within 4Å: Chain K: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Chain U: R.102, E.128 Ligand excluded by PLIP MPD.64: 9 residues within 4Å: Chain L: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Chain W: R.102 Ligand excluded by PLIP MPD.69: 10 residues within 4Å: Chain M: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Chain P: R.102, E.128 Ligand excluded by PLIP MPD.75: 8 residues within 4Å: Chain N: K.2, G.3, D.4, L.65, V.111, H.112, D.113 Chain R: R.102 Ligand excluded by PLIP MPD.80: 10 residues within 4Å: Chain E: R.102, E.128 Chain O: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Ligand excluded by PLIP MPD.86: 9 residues within 4Å: Chain G: R.102 Chain P: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Ligand excluded by PLIP MPD.91: 10 residues within 4Å: Chain Q: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Chain T: R.102, E.128 Ligand excluded by PLIP MPD.97: 8 residues within 4Å: Chain R: K.2, G.3, D.4, L.65, V.111, H.112, D.113 Chain V: R.102 Ligand excluded by PLIP MPD.102: 10 residues within 4Å: Chain A: R.102, E.128 Chain S: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Ligand excluded by PLIP MPD.108: 9 residues within 4Å: Chain C: R.102 Chain T: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Ligand excluded by PLIP MPD.113: 10 residues within 4Å: Chain U: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Chain X: R.102, E.128 Ligand excluded by PLIP MPD.119: 8 residues within 4Å: Chain N: R.102 Chain V: K.2, G.3, D.4, L.65, V.111, H.112, D.113 Ligand excluded by PLIP MPD.124: 10 residues within 4Å: Chain I: R.102, E.128 Chain W: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Ligand excluded by PLIP MPD.130: 9 residues within 4Å: Chain K: R.102 Chain X: K.2, G.3, D.4, R.61, L.65, V.111, H.112, D.113 Ligand excluded by PLIP

66 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 4 residues within 4Å: Chain A: R.61, F.64 Chain D: E.128, D.132 Ligand excluded by PLIP SO4.5: 3 residues within 4Å: Chain A: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.6: 1 residues within 4Å: Chain A: Q.9 Ligand excluded by PLIP SO4.7: 2 residues within 4Å: Chain A: Q.9, H.10 Ligand excluded by PLIP SO4.10: 6 residues within 4Å: Chain B: R.117 Chain F: R.117 Chain J: R.117, K.121 Ligands: SO4.32, SO4.54 Ligand excluded by PLIP SO4.11: 4 residues within 4Å: Chain B: R.61, F.64 Chain F: E.128, D.132 Ligand excluded by PLIP SO4.15: 7 residues within 4Å: Chain C: R.117, K.121 Chain Q: R.117, D.118, K.121 Chain T: R.117, K.121 Ligand excluded by PLIP SO4.16: 4 residues within 4Å: Chain C: R.61, F.64 Chain Q: E.128, D.132 Ligand excluded by PLIP SO4.17: 3 residues within 4Å: Chain C: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.21: 3 residues within 4Å: Chain D: R.61, F.64 Chain S: E.128 Ligand excluded by PLIP SO4.22: 3 residues within 4Å: Chain D: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.26: 4 residues within 4Å: Chain E: R.61, F.64 Chain H: E.128, D.132 Ligand excluded by PLIP SO4.27: 3 residues within 4Å: Chain E: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.28: 1 residues within 4Å: Chain E: Q.9 Ligand excluded by PLIP SO4.29: 2 residues within 4Å: Chain E: Q.9, H.10 Ligand excluded by PLIP SO4.32: 6 residues within 4Å: Chain B: R.117, K.121 Chain F: R.117 Chain J: R.117 Ligands: SO4.10, SO4.54 Ligand excluded by PLIP SO4.33: 4 residues within 4Å: Chain F: R.61, F.64 Chain J: E.128, D.132 Ligand excluded by PLIP SO4.37: 7 residues within 4Å: Chain G: R.117, K.121 Chain M: R.117, D.118, K.121 Chain P: R.117, K.121 Ligand excluded by PLIP SO4.38: 4 residues within 4Å: Chain G: R.61, F.64 Chain M: E.128, D.132 Ligand excluded by PLIP SO4.39: 3 residues within 4Å: Chain G: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.43: 3 residues within 4Å: Chain H: R.61, F.64 Chain O: E.128 Ligand excluded by PLIP SO4.44: 3 residues within 4Å: Chain H: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.48: 4 residues within 4Å: Chain I: R.61, F.64 Chain L: E.128, D.132 Ligand excluded by PLIP SO4.49: 3 residues within 4Å: Chain I: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.50: 1 residues within 4Å: Chain I: Q.9 Ligand excluded by PLIP SO4.51: 2 residues within 4Å: Chain I: Q.9, H.10 Ligand excluded by PLIP SO4.54: 6 residues within 4Å: Chain B: R.117 Chain F: R.117, K.121 Chain J: R.117 Ligands: SO4.10, SO4.32 Ligand excluded by PLIP SO4.55: 4 residues within 4Å: Chain B: E.128, D.132 Chain J: R.61, F.64 Ligand excluded by PLIP SO4.59: 7 residues within 4Å: Chain K: R.117, K.121 Chain U: R.117, D.118, K.121 Chain X: R.117, K.121 Ligand excluded by PLIP SO4.60: 4 residues within 4Å: Chain K: R.61, F.64 Chain U: E.128, D.132 Ligand excluded by PLIP SO4.61: 3 residues within 4Å: Chain K: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.65: 3 residues within 4Å: Chain L: R.61, F.64 Chain W: E.128 Ligand excluded by PLIP SO4.66: 3 residues within 4Å: Chain L: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.70: 4 residues within 4Å: Chain M: R.61, F.64 Chain P: E.128, D.132 Ligand excluded by PLIP SO4.71: 3 residues within 4Å: Chain M: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.72: 1 residues within 4Å: Chain M: Q.9 Ligand excluded by PLIP SO4.73: 2 residues within 4Å: Chain M: Q.9, H.10 Ligand excluded by PLIP SO4.76: 6 residues within 4Å: Chain N: R.117 Chain R: R.117 Chain V: R.117, K.121 Ligands: SO4.98, SO4.120 Ligand excluded by PLIP SO4.77: 4 residues within 4Å: Chain N: R.61, F.64 Chain R: E.128, D.132 Ligand excluded by PLIP SO4.81: 7 residues within 4Å: Chain E: R.117, D.118, K.121 Chain H: R.117, K.121 Chain O: R.117, K.121 Ligand excluded by PLIP SO4.82: 4 residues within 4Å: Chain E: E.128, D.132 Chain O: R.61, F.64 Ligand excluded by PLIP SO4.83: 3 residues within 4Å: Chain O: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.87: 3 residues within 4Å: Chain G: E.128 Chain P: R.61, F.64 Ligand excluded by PLIP SO4.88: 3 residues within 4Å: Chain P: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.92: 4 residues within 4Å: Chain Q: R.61, F.64 Chain T: E.128, D.132 Ligand excluded by PLIP SO4.93: 3 residues within 4Å: Chain Q: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.94: 1 residues within 4Å: Chain Q: Q.9 Ligand excluded by PLIP SO4.95: 2 residues within 4Å: Chain Q: Q.9, H.10 Ligand excluded by PLIP SO4.98: 6 residues within 4Å: Chain N: R.117, K.121 Chain R: R.117 Chain V: R.117 Ligands: SO4.76, SO4.120 Ligand excluded by PLIP SO4.99: 4 residues within 4Å: Chain R: R.61, F.64 Chain V: E.128, D.132 Ligand excluded by PLIP SO4.103: 7 residues within 4Å: Chain A: R.117, D.118, K.121 Chain D: R.117, K.121 Chain S: R.117, K.121 Ligand excluded by PLIP SO4.104: 4 residues within 4Å: Chain A: E.128, D.132 Chain S: R.61, F.64 Ligand excluded by PLIP SO4.105: 3 residues within 4Å: Chain S: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.109: 3 residues within 4Å: Chain C: E.128 Chain T: R.61, F.64 Ligand excluded by PLIP SO4.110: 3 residues within 4Å: Chain T: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.114: 4 residues within 4Å: Chain U: R.61, F.64 Chain X: E.128, D.132 Ligand excluded by PLIP SO4.115: 3 residues within 4Å: Chain U: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.116: 1 residues within 4Å: Chain U: Q.9 Ligand excluded by PLIP SO4.117: 2 residues within 4Å: Chain U: Q.9, H.10 Ligand excluded by PLIP SO4.120: 6 residues within 4Å: Chain N: R.117 Chain R: R.117, K.121 Chain V: R.117 Ligands: SO4.76, SO4.98 Ligand excluded by PLIP SO4.121: 4 residues within 4Å: Chain N: E.128, D.132 Chain V: R.61, F.64 Ligand excluded by PLIP SO4.125: 7 residues within 4Å: Chain I: R.117, D.118, K.121 Chain L: R.117, K.121 Chain W: R.117, K.121 Ligand excluded by PLIP SO4.126: 4 residues within 4Å: Chain I: E.128, D.132 Chain W: R.61, F.64 Ligand excluded by PLIP SO4.127: 3 residues within 4Å: Chain W: R.39, H.43, Y.133 Ligand excluded by PLIP SO4.131: 3 residues within 4Å: Chain K: E.128 Chain X: R.61, F.64 Ligand excluded by PLIP SO4.132: 3 residues within 4Å: Chain X: R.39, H.43, Y.133 Ligand excluded by PLIP

6 x K: POTASSIUM ION(Non-covalent)

K.8: 8 residues within 4Å: Chain B: N.148, Q.151 Chain C: N.148, Q.151 Chain D: N.148, Q.151 Chain I: N.148, Q.151 No protein-ligand interaction detected (PLIP) K.30: 8 residues within 4Å: Chain A: N.148, Q.151 Chain F: N.148, Q.151 Chain G: N.148, Q.151 Chain H: N.148, Q.151 No protein-ligand interaction detected (PLIP) K.52: 8 residues within 4Å: Chain E: N.148, Q.151 Chain J: N.148, Q.151 Chain K: N.148, Q.151 Chain L: N.148, Q.151 No protein-ligand interaction detected (PLIP) K.74: 8 residues within 4Å: Chain N: N.148, Q.151 Chain O: N.148, Q.151 Chain P: N.148, Q.151 Chain U: N.148, Q.151 No protein-ligand interaction detected (PLIP) K.96: 8 residues within 4Å: Chain M: N.148, Q.151 Chain R: N.148, Q.151 Chain S: N.148, Q.151 Chain T: N.148, Q.151 No protein-ligand interaction detected (PLIP) K.118: 8 residues within 4Å: Chain Q: N.148, Q.151 Chain V: N.148, Q.151 Chain W: N.148, Q.151 Chain X: N.148, Q.151 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Punchi Hewage, A.N.D. et al., Small Molecule Inhibitors of the BfrB-Bfd Interaction Decrease Pseudomonas aeruginosa Fitness and Potentiate Fluoroquinolone Activity. J.Am.Chem.Soc. (2019)

Release Date

2019-05-08

Peptides

Bacterioferritin: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
A

F
B

G
C

H
D

I
A

J
B

K
C

L
D

M
A

N
B

O
C

P
D

Q
A

R
B

S
C

T
D

U
A

V
B

W
C

X
D

Bacterioferritin

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