SMTL ID : 6nnp.1

Xanthomonas citri Dephospho-PGM in complex with glucose-6-phosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: S.117, D.257, D.259, D.261 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.117, A:D.257, A:D.259, A:D.261, H2O.1, H2O.2

1 x G6P: 6-O-phosphono-alpha-D-glucopyranose(Non-covalent)

G6P.2: 14 residues within 4Å: Chain A: Y.29, R.300, G.322, H.323, E.340, S.342, H.344, Y.346, R.434, S.436, N.437, T.438, R.443 Ligands: PO4.3 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:R.300, A:R.300, A:G.322, A:H.323, A:E.340, A:S.342, A:Y.346, A:Y.346, A:N.437, A:T.438 Water bridges: A:K.127, A:R.434, A:N.437, A:R.443 Salt bridges: A:R.300, A:H.344, A:R.434, A:R.443

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 4 residues within 4Å: Chain A: S.117, H.118, R.262 Ligands: G6P.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.117, A:H.118 Water bridges: A:R.262, A:R.262, A:H.344 Salt bridges: A:H.118, A:R.262

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stiers, K.M. et al., Structural and dynamical description of the enzymatic reaction of a phosphohexomutase. Struct Dyn. (2019)

Release Date

2019-04-10

Peptides

Phosphoglucomutase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphoglucomutase

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