SMTL ID : 6no8.1

PIM1 in complex with Cpd9 ((R)-5-amino-N-(3-(4-aminoazepan-1-yl)-1H-pyrazol-4-yl)-2-(2,6-difluorophenyl)thiazole-4-carboxamide)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.38 Å

Oligo State

monomer

Ligands

1 x KUY: 5-amino-N-{5-[(4S)-4-aminoazepan-1-yl]-1-methyl-1H-pyrazol-4-yl}-2-(2,6-difluorophenyl)-1,3-thiazole-4-carboxamide(Non-covalent)

KUY.1: 17 residues within 4Å: Chain A: L.12, G.13, F.17, V.20, A.33, K.35, I.72, L.88, E.89, R.90, V.94, D.96, E.139, N.140, L.142, I.153, D.154 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.12, A:L.12, A:V.94, A:L.142 Hydrogen bonds: A:E.89, A:E.139 Water bridges: A:D.154

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 2 residues within 4Å: Chain A: R.226, S.229 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.229 Salt bridges: A:R.226

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murray, J.M. et al., Optimization of Pan-Pim Kinase Activity and Oral Bioavailability Leading to Diaminopyrazole (GDC-0339) for the Treatment of Multiple Myeloma. To be published

Release Date

2019-11-27

Peptides

Serine/threonine-protein kinase pim-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase pim-1

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