- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.25 Å
- Oligo State
- monomer
- Ligands
- 1 x U- G- U- A- A- A- U- A: RNA (5'-R(*UP*GP*UP*AP*AP*AP*UP*A)-3')(Non-covalent)
- 13 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 3 residues within 4Å:- Chain A: A.213, Q.225
- Ligands: EDO.3
No protein-ligand interaction detected (PLIP)EDO.3: 5 residues within 4Å:- Chain A: Q.225, N.226, R.228, E.229
- Ligands: EDO.2
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.226, A:R.228
EDO.4: 2 residues within 4Å:- Chain A: D.136, L.137
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:L.137
- Water bridges: A:D.136, A:D.136
EDO.5: 4 residues within 4Å:- Chain A: D.315, G.316, Y.317, I.318
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.315
EDO.6: 2 residues within 4Å:- Chain A: L.93, N.96
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.96, A:Y.100, A:Y.100
EDO.7: 6 residues within 4Å:- Chain A: F.62, E.63, I.66, G.67, R.103, K.106
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.63, A:I.66, A:K.106
EDO.8: 2 residues within 4Å:- Chain A: K.58, A.94
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.58
EDO.9: 5 residues within 4Å:- Chain A: A.307, D.311, S.368, D.371, W.372
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:A.307, A:D.371, A:D.371
EDO.10: 5 residues within 4Å:- Chain A: Q.86, I.89, G.90, S.130, N.134
No protein-ligand interaction detected (PLIP)EDO.11: 6 residues within 4Å:- Chain A: H.292, E.295, K.296, L.299
- Ligands: U-G-U-A-A-A-U-A.1, EDO.12
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.296
EDO.12: 4 residues within 4Å:- Chain A: Q.257, K.296
- Ligands: U-G-U-A-A-A-U-A.1, EDO.11
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.296
EDO.13: 8 residues within 4Å:- Chain A: M.332, F.333, H.334, Q.335, N.338, F.390, S.392
- Ligands: U-G-U-A-A-A-U-A.1
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:F.333, A:N.338, A:S.392
- Water bridges: A:S.392
EDO.14: 1 residues within 4Å:- Ligands: U-G-U-A-A-A-U-A.1
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bhat, V.D. et al., Engineering a conserved RNA regulatory protein repurposes its biological function in vivo . Elife (2019)
- Release Date
- 2019-01-30
- Peptides
- Fem-3 mRNA-binding factor 2: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.25 Å
- Oligo State
- monomer
- Ligands
- 1 x U- G- U- A- A- A- U- A: RNA (5'-R(*UP*GP*UP*AP*AP*AP*UP*A)-3')(Non-covalent)
- 13 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bhat, V.D. et al., Engineering a conserved RNA regulatory protein repurposes its biological function in vivo . Elife (2019)
- Release Date
- 2019-01-30
- Peptides
- Fem-3 mRNA-binding factor 2: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A