SMTL ID : 6npy.1

Cryo-EM structure of NLRP3 bound to NEK7

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 12 residues within 4Å: Chain A: R.165, Y.166, T.167, G.229, K.230, T.231, I.232, Y.379, P.410, L.411, W.414, H.520 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:T.167, A:T.167, A:G.227, A:G.229, A:K.230, A:T.231, A:I.232 Salt bridges: A:K.230, A:H.520, A:H.520

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sharif, H. et al., Structural mechanism for NEK7-licensed activation of NLRP3 inflammasome. Nature (2019)

Release Date

2019-06-19

Peptides

NACHT, LRR and PYD domains-containing protein 3: A
Protein kinase R,Serine/threonine-protein kinase Nek7: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

NACHT, LRR and PYD domains-containing protein 3

Protein kinase R,Serine/threonine-protein kinase Nek7