SMTL ID : 6npz.1 (1 other biounit)

Crystal structure of Akt1 (aa 123-480) kinase with a bisubstrate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

hetero-1-1-mer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 2 residues within 4Å: Chain A: E.192, H.232 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.192, A:H.232, H2O.5, H2O.6 MN.4: 3 residues within 4Å: Chain A: N.157, D.170 Chain B: X.7 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.170, H2O.2, H2O.9

2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.2: 3 residues within 4Å: Chain A: W.291, Q.292, Y.295 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.292, A:Y.295 PGE.3: 7 residues within 4Å: Chain A: R.224, L.225, F.227, Y.228, L.238, E.242 Chain B: R.2 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Water bridges: B:G.1, B:R.2 Hydrogen bonds: A:Y.228, A:E.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chu, N. et al., Akt Kinase Activation Mechanisms Revealed Using Protein Semisynthesis. Cell (2018)

Release Date

2019-01-30

Peptides

RAC-alpha serine/threonine-protein kinase: A
bisubstrate: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
F

RAC-alpha serine/threonine-protein kinase

bisubstrate

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