SMTL ID : 6nsx.1

Yeast Hsh155 Ligand bound to Human Tat-SF1 Motif

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x SER- ARG- TRP- ASP- VAL- LYS: Hsh155(Non-covalent)

SER-ARG-TRP-ASP-VAL-LYS.1: 13 residues within 4Å: Chain A: V.24, E.27, I.28, D.31, L.32, E.35, L.73, R.76, W.77, F.78, G.79, G.80, I.83 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.73, A:F.78, A:I.83 Hydrogen bonds: A:E.27, A:D.31, A:D.31, A:D.31, A:W.77, A:G.79, A:G.80 Water bridges: A:E.27, A:E.27 Salt bridges: A:R.76 pi-Stacking: A:F.78, A:F.78

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain A: Q.41, R.61 Ligand excluded by PLIP CL.3: 3 residues within 4Å: Chain A: R.33, K.44, L.45 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Talkish, J. et al., Cus2 enforces the first ATP-dependent step of splicing by binding to yeast SF3b1 through a UHM-ULM interaction. Rna (2019)

Release Date

2019-06-05

Peptides

HIV Tat-specific factor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

HIV Tat-specific factor 1