SMTL ID : 6nva.3 (3 other biounits)

Crystal structure of Escherichia coli dihydrodipicolinate synthase and propionate covalently bound to K161.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.16 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: S.50, A.51, G.80, V.105, Y.108 Chain B: N.82, Y.109 6 PLIP interactions: 4 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:S.50, A:S.50, B:N.82, B:N.82 Water bridges: A:G.80, A:V.105 GOL.2: 5 residues within 4Å: Chain A: N.82, Y.109 Chain B: S.50, A.51, Y.108 7 PLIP interactions: 5 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:S.50, B:S.50, A:N.82, A:N.82 Water bridges: B:G.80, B:G.80, B:Y.108

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 4 residues within 4Å: Chain B: S.187, D.189, S.192, F.196 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chooback, L. et al., Crystal structure of Escherichia coli dihydrodipicolinate synthase and propionate covalently bound to K161. To Be Published

Release Date

2019-02-27

Peptides

4-hydroxy-tetrahydrodipicolinate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

4-hydroxy-tetrahydrodipicolinate synthase

Related Entries With Identical Sequence