SMTL ID : 6nvj.1

FGFR4 complex with N-(2-((5-((2,6-dichloro-3,5-dimethoxybenzyl)oxy)pyrimidin-2-yl)amino)-3-fluorophenyl)acrylamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.107, R.117, N.167 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.167 Salt bridges: A:K.107, A:R.117 SO4.2: 4 residues within 4Å: Chain A: R.253, P.254, P.255, H.256 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.256 Salt bridges: A:R.253, A:H.256 SO4.3: 4 residues within 4Å: Chain A: R.115, R.118, G.230, S.231 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.231 Salt bridges: A:R.115, A:R.118 SO4.4: 5 residues within 4Å: Chain A: R.250, W.269, H.270, A.271, A.272 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.271, A:A.272 Salt bridges: A:R.250, A:H.270

1 x XL5: N-[2-({5-[(2,6-dichloro-3,5-dimethoxyphenyl)methoxy]pyrimidin-2-yl}amino)-3-fluorophenyl]propanamide(Covalent)

XL5.5: 20 residues within 4Å: Chain A: L.25, V.33, R.35, T.51, A.53, K.55, E.72, M.76, I.86, V.100, V.102, E.103, C.104, A.105, A.106, G.108, L.162, A.172, D.173, F.174 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.25, A:T.51, A:V.102 Hydrogen bonds: A:A.105, A:A.105, A:A.105, A:D.173 Water bridges: A:E.72

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, X. et al., Rotational Freedom, Steric Hindrance, and Protein Dynamics Explain BLU554 Selectivity for the Hinge Cysteine of FGFR4. Acs Med.Chem.Lett. (2019)

Release Date

2019-07-10

Peptides

Fibroblast growth factor receptor 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fibroblast growth factor receptor 4

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