SMTL ID : 6nw2.1 (1 other biounit)

Structure of human RIPK1 kinase domain in complex with compound 11

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x L4Y: (5R)-5-methyl-N-[(3S)-5-methyl-4-oxo-2,3,4,5-tetrahydro-1,5-benzoxazepin-3-yl]-4,5,6,7-tetrahydro-2H-indazole-3-carboxamide(Non-covalent)

L4Y.1: 18 residues within 4Å: Chain A: V.47, I.59, K.61, M.83, L.86, V.91, V.92, L.94, L.106, V.107, M.108, H.152, I.170, A.171, D.172, L.173, L.175, F.178 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.47, A:V.47, A:I.59, A:K.61, A:K.61, A:L.86, A:V.91, A:V.92, A:D.172, A:L.173 Hydrogen bonds: A:L.94, A:D.172

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hamilton, G.L. et al., Potent and selective inhibitors of receptor-interacting protein kinase 1 that lack an aromatic back pocket group. Bioorg.Med.Chem.Lett. (2019)

Release Date

2019-05-01

Peptides

Receptor-interacting serine/threonine-protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Receptor-interacting serine/threonine-protein kinase 1

Related Entries With Identical Sequence