SMTL ID : 6nw4.1

Evolution of a computationally designed Kemp eliminase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.35, E.38, F.39, R.42 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.35, A:R.42 SO4.2: 8 residues within 4Å: Chain A: R.52, R.181, W.209, G.210, G.211, I.212, G.232, S.233 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.181, A:W.209, A:I.212, A:G.232, A:S.233 Salt bridges: A:R.52 SO4.3: 3 residues within 4Å: Chain A: S.213, E.214, K.241 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.213, A:S.213 Water bridges: A:K.241, A:K.241 Salt bridges: A:K.241 SO4.4: 3 residues within 4Å: Chain A: P.19, S.20, R.22 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.20 Salt bridges: A:R.22, A:K.114

1 x 6NT: 6-NITROBENZOTRIAZOLE(Non-covalent)

6NT.5: 8 residues within 4Å: Chain A: A.50, R.52, A.80, A.82, W.109, E.177, C.179, W.209 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:W.109 Water bridges: A:R.52 pi-Stacking: A:W.109, A:W.109, A:W.109, A:W.209, A:W.209, A:W.209

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bunzel, H.A. et al., Emergence of a Negative Activation Heat Capacity during Evolution of a Designed Enzyme. J.Am.Chem.Soc. (2019)

Release Date

2019-07-24

Peptides

Indole-3-glycerol phosphate synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Indole-3-glycerol phosphate synthase