SMTL ID : 6nzr.1

CRYSTAL STRUCTURE OF TYROSINE KINASE 2 JH2 (PSEUDO KINASE DOMAIN) COMPLEXED WITH Compound_12 AKA 4-[(2-methanesulfonylphenyl)amino]-N-(H3)methyl-6-[(pyridin-2- yl)amino]pyridazine-3-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.56 Å

Oligo State

homo-dimer

Ligands

2 x LAJ: N-methyl-4-{[2-(methylsulfonyl)phenyl]amino}-6-[(pyridin-2-yl)amino]pyridazine-3-carboxamide(Non-covalent)

LAJ.1: 21 residues within 4Å: Chain A: L.43, G.44, Q.45, V.51, V.88, K.90, A.119, F.120, T.135, E.136, Y.137, V.138, E.139, H.140, G.141, P.142, R.186, N.187, L.189, S.206, D.207 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.43, A:V.51, A:L.189 Hydrogen bonds: A:K.90, A:T.135, A:E.136, A:V.138, A:V.138, A:S.206 LAJ.3: 21 residues within 4Å: Chain B: L.43, G.44, Q.45, V.51, V.88, K.90, A.119, F.120, T.135, E.136, Y.137, V.138, E.139, H.140, G.141, P.142, R.186, N.187, L.189, S.206, D.207 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:L.43, B:V.51, B:L.189 Hydrogen bonds: B:K.90, B:T.135, B:E.136, B:V.138, B:V.138, B:S.206

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: R.192, G.198, T.199, S.200 Chain B: R.192 7 PLIP interactions: 6 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:S.200, A:S.200 Water bridges: A:R.192, A:R.192, A:R.192 Salt bridges: A:R.192, B:R.192 SO4.4: 5 residues within 4Å: Chain A: R.192 Chain B: H.140, R.192, L.193, G.194 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:L.193, B:G.194 Salt bridges: B:H.140, A:R.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wrobleski, S.T. et al., Highly Selective Inhibition of Tyrosine Kinase 2 (TYK2) for the Treatment of Autoimmune Diseases: Discovery of the Allosteric Inhibitor BMS-986165. J.Med.Chem. (2019)

Release Date

2019-07-31

Peptides

Non-receptor tyrosine-protein kinase TYK2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Non-receptor tyrosine-protein kinase TYK2