SMTL ID : 6o1e.1

The crystal structure of human MORC3 ATPase-CW in complex with AMPPNP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.41 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.413, C.416, C.435, C.446 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.413, A:C.416, A:C.435, A:C.446 ZN.4: 4 residues within 4Å: Chain B: C.413, C.416, C.435, C.446 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.413, B:C.416, B:C.435, B:C.446

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: N.39, K.88 Ligands: ANP.3 No protein-ligand interaction detected (PLIP) MG.5: 3 residues within 4Å: Chain B: N.39, K.88 Ligands: ANP.6 No protein-ligand interaction detected (PLIP)

2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.3: 21 residues within 4Å: Chain A: E.35, N.39, D.44, V.45, D.67, G.71, M.72, M.80, S.86, K.88, G.98, L.99, Y.100, G.101, N.102, G.103, F.104, K.105, T.194, K.358 Ligands: MG.2 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:N.39, A:D.44, A:D.44, A:D.67, A:K.76, A:S.86, A:S.86, A:K.88, A:L.99, A:Y.100, A:G.101, A:N.102, A:N.102, A:G.103, A:F.104, A:K.358, A:K.358 Water bridges: A:D.67 Salt bridges: A:K.88, A:K.105 ANP.6: 21 residues within 4Å: Chain B: E.35, N.39, D.44, V.45, D.67, G.71, M.72, M.80, S.86, K.88, G.98, L.99, Y.100, G.101, N.102, G.103, F.104, K.105, T.194, K.358 Ligands: MG.5 19 PLIP interactions: 19 interactions with chain B Hydrogen bonds: B:N.39, B:D.44, B:D.67, B:K.76, B:S.86, B:S.86, B:K.88, B:L.99, B:Y.100, B:G.101, B:N.102, B:N.102, B:G.103, B:F.104, B:K.358, B:K.358 Water bridges: B:E.35 Salt bridges: B:K.88, B:K.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Mechanism for autoinhibition and activation of the MORC3 ATPase. Proc. Natl. Acad. Sci. U.S.A. (2019)

Release Date

2019-03-20

Peptides

MORC family CW-type zinc finger protein 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

MORC family CW-type zinc finger protein 3