SMTL ID : 6o4p.1 (1 other biounit)

The crystal structure of the interleukin 11 alpha receptor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.43 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN.1: 5 residues within 4Å: Chain A: L.123, N.172, T.174, T.183, L.185 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 4 residues within 4Å: Chain A: D.102, N.105, H.161, S.223 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:D.102 Hydrogen bonds: A:D.102

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: R.93, T.183, R.184, L.185 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.183, A:R.184, A:L.185 Salt bridges: A:R.93 SO4.4: 2 residues within 4Å: Chain A: R.93, R.184 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.93, A:R.184 SO4.5: 4 residues within 4Å: Chain A: R.93, A.181, S.182, T.183 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.183 SO4.6: 3 residues within 4Å: Chain A: S.206, S.294, T.295 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.206, A:T.295, A:T.295 SO4.7: 3 residues within 4Å: Chain A: W.246, S.247, T.248 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.248, A:T.248 SO4.8: 2 residues within 4Å: Chain A: W.246, R.270 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.246 Salt bridges: A:R.270

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Metcalfe, R.D. et al., The structure of the extracellular domains of human interleukin 11 alpha receptor reveals mechanisms of cytokine engagement. J.Biol.Chem. (2020)

Release Date

2020-05-06

Peptides

Interleukin-11 receptor subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Interleukin-11 receptor subunit alpha

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