SMTL ID : 6o4x.1

Binary complex of native hAChE with 9-aminoacridine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: Y.127, V.297, F.298, F.300, Y.340, F.341, Y.344 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.127, A:F.298, A:Y.340 Water bridges: A:Y.340 GOL.2: 9 residues within 4Å: Chain A: E.84, M.88, A.437, T.439, L.440, S.441, Y.452, E.455, Y.468 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.441, A:S.441, A:Y.468 Water bridges: A:E.84, A:T.439 GOL.3: 6 residues within 4Å: Chain A: K.335, V.432, E.434, Y.513, R.524, R.528 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.434, A:R.524, A:R.528 GOL.6: 8 residues within 4Å: Chain B: Y.127, W.289, V.297, F.298, F.300, Y.340, F.341, Y.344 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:F.298, B:Y.340, B:Y.340 GOL.7: 7 residues within 4Å: Chain B: E.84, M.88, T.439, L.440, S.441, Y.452, E.455 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:T.439, B:T.439, B:S.441, B:S.441

1 x NO3: NITRATE ION(Non-functional Binders)

NO3.4: 5 residues within 4Å: Chain A: K.335, D.336, E.399, W.445, G.447 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.335, A:K.335, A:E.399

2 x AA: 9-AMINOACRIDINE(Non-covalent)

AA.5: 9 residues within 4Å: Chain A: W.89, G.123, G.124, E.205, Y.340, W.442, H.450, G.451, Y.452 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:W.442, A:Y.452 Water bridges: A:W.89, A:Y.127 pi-Stacking: A:W.89, A:W.89, A:W.89, A:Y.340 AA.8: 10 residues within 4Å: Chain B: G.85, W.89, G.123, G.124, E.205, Y.340, W.442, H.450, G.451, Y.452 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:W.442, B:Y.452 Water bridges: B:W.89, B:Y.340 pi-Stacking: B:W.89, B:W.89, B:W.89, B:Y.340

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gerlits, O. et al., A new crystal form of human acetylcholinesterase for exploratory room-temperature crystallography studies. Chem.Biol.Interact. (2019)

Release Date

2019-06-19

Peptides

Acetylcholinesterase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Acetylcholinesterase

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