SMTL ID : 6o5k.1

Murine TRIM28 Bbox1 domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.23, C.26, C.44, C.47 Chain B: R.53 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.23, A:C.26, A:C.44, A:C.47 ZN.2: 4 residues within 4Å: Chain A: C.36, C.39, H.51, H.60 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.36, A:C.39, A:H.51, A:H.60 ZN.3: 4 residues within 4Å: Chain B: C.23, C.26, C.44, C.47 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.23, B:C.26, B:C.44, B:C.47 ZN.4: 4 residues within 4Å: Chain B: C.36, C.39, H.51, H.60 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.36, B:C.39, B:H.51, B:H.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sun, Y. et al., A Dissection of Oligomerization by the TRIM28 Tripartite Motif and the Interaction with Members of the Krab-ZFP Family. J.Mol.Biol. (2019)

Release Date

2019-06-19

Peptides

Transcription intermediary factor 1-beta: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transcription intermediary factor 1-beta