SMTL ID : 6o8h.1

Crystal structure of UvrB mutant bound to duplex DNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.39 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: K.121, R.207, D.208, E.209, H.210 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.208, A:E.209, A:H.210 Salt bridges: A:K.121, A:R.207, A:H.210 SO4.2: 7 residues within 4Å: Chain A: A.40, T.41, G.42, T.43, G.44, K.45, R.543 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.42, A:T.43, A:G.44, A:K.45, A:R.543 Water bridges: A:K.45, A:T.46 Salt bridges: A:K.45

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: L.401, E.402, S.404 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain A: R.169, R.183 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, S.J. et al., Mechanism of DNA Lesion Homing and Recognition by the Uvr Nucleotide Excision Repair System. Res (2019)

Release Date

2020-01-22

Peptides

UvrABC system protein B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UvrABC system protein B