SMTL ID : 6oae.1

Crystal Structure of Human Mucin-like Protocadherin EC1-2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 3 residues within 4Å: Chain A: V.8, N.9, D.11 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.8 Water bridges: A:D.11, A:D.11

3 x CA: CALCIUM ION(Non-covalent)

CA.2: 7 residues within 4Å: Chain A: E.17, E.63, D.92, V.93, D.95, N.96, D.131 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.17, A:E.63, A:D.92, A:D.95, A:D.131 CA.3: 4 residues within 4Å: Chain A: E.17, D.61, E.63, D.95 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.17, A:D.61, A:E.63, A:D.95, H2O.2 CA.4: 7 residues within 4Å: Chain A: N.94, N.96, D.129, D.131, D.134, D.183, H.193 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.96, A:D.129, A:D.129, A:D.134, A:D.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gray, M.E. et al., Crystal Structure of Human Mucin-like Protocadherin EC1-2. To be published

Release Date

2020-03-18

Peptides

Mucin-like protocadherin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mucin-like protocadherin